Richard D. answered 07/16/19
PhD in Molecular Biology with 7+ years tutoring experience
The hydrolase enzymes have to be able to freely access a substrate in order to bind to it and break up the molecule in question. Lysosome proteins are glycosylated, or heavily modified with sugar residues. These block the hydrolase enzymes from reaching their binding sites on the hydrolase enzymes.
It is similar to the stomach having a mucus layer to prevent the digestive enzymes from digesting the stomach.