If the amino group of a protein has a pKa of 8 when exposed to H2O, would you expect the pKa to be higher/lower than 8 if the group were buried in the hydrophobic protein interior?
Rohini Q.
answered 02/14/22
An outstanding Biochemist, PhD with 20+yrs of teaching experience
It is energetically unfavorable for the alpha amino group to be charged in the hydrophobic interior, thus the pka would be lower.
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