Inactive Tutor answered 10/11/17
Sonia B.
asked 10/10/17template and coding DNA
If the template strand of DNA is 3’-xxx-5’, what are the first 4 amino acids of the protein?
If the coding strand of DNA is 3’-xxx-5’, what are the first 4 amino acids of the protein?
Template: Coding: Answers
TAC.AAA.TTG.CCA TGG.CAA.TTT.GTA
TAC.TAA.CGG.GCA TGC.CCG.TTA.GTA
TAC.TAT.GTA.CAC GTG.TAC.ATA.GTA
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2 Answers By Expert Tutors
Tutor
New to Wyzant
I'm not sure the 2nd question is intended as a trick; the intent may be to think of the strand as being written in reverse order. In other words, the while the default is
5'-TGG.CAA.TTT.GTA-3'
the second question is asking about
3'-TGG.CAA.TTT.GTA-5'
If this is the correct interpretation, you should rearrange to the normal polarity (simply re-write from right to left) to get:
5'-ATG-TTT-AAC-GGT-3'
Once re-arranged, you would use a codon table to generate the correct amino acid sequence.
AUG = methionine (the famous 'start' codon)[remember that in RNA, uracil is used instead of thymine, so you should look up AUG instead of ATG, UUU instead of TTT, etc.)
Inactive Tutor answered 10/10/17
Tutor
New to Wyzant
Second part of the question appears to be a trick, coding strand is never 3’-xxx-5’
TGG.CAA.TTT.GTA Trp, Gln, Phe, Val,
TGC.CCG.TTA.GTA Cys, Pro, Leu, Val
GTG.TAC.ATA.GTA Val, Tyr, ile, Val
Best
Sonia B.
Hello for the coding one:
How did u get Trp, Gln, Phe, Val for TGG.CAA.TTT.GTA ??
did not understand
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10/11/17
Inactive Tutor
Sonia:Generally, TEMPLATE refers to 'the strand from which the mRNA will be made' (i.e. the RNA will be complementary to the strand shown), where as coding means the mRNA will be 'just like' the strand shown... remembering that RNA will incorporate uracil (U) instead of thymine (T).
So in looking at TGG.CAA.TTT.GTA (and assuming that the 'dots' indicate the breaks between codons), we first turn this into an RNA by replacing T with U:
UGG.CAA.TTT.GUA
We then look these up in a codon table (I prefer circular ones like this, though your book will have one that may've been covered in your class):
https://www.thinkbio.guru/tBioWordPress/wp-content/uploads/2017/02/codons.png
Starting with the first codon, UGG, we find U at the center of the table, then move outward to the next ring, and find G, and then the final ring, G and we come to "Trp', which is the abbreviation for Tryptophan. So know the ribosome would add a Tryptophan in response to an mRNA wit ha UGG.
Follow the same process for the others, and see what you get!
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10/11/17
Sonia B.
hello
what would the template strand of DNA is 3’-xxx-5’, what are the first 4 amino acids of the protein?
TAC.AAA.TTG.CCA
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10/11/17
Inactive Tutor
If the TEMPLATE is running 3' => 5', then when you synthesize ONTO it (when you make the complementary nucleotides) what you write will be going in the 5' to 3' direction (because the two strands are always ANTI-parallel).
So--the COMPLEMENTARY base to T is A
Complement to A is... U (remember, we are synthesizing an RNA, so we incorporate U, not T)
complement to C is G
since we are 'looking at' 3' to 5', what we are making is 5' to 3' (the 'usual' or 'correct' orientation)
So your first codon is 5'-AUG-3'... and keep going from there! But now the strand is oriented correctly, so the first amino acid would be the one resulting from reading an AUG codon.
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10/11/17
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Sonia B.
10/10/17